[REPOSITORIES]

[REPOSITORIES]
  ENSEMBL_URL = https://github.com/Ensembl
  ENSEMBL_BRANCH = release/84

  BIOPERL_URL = https://github.com/bioperl
  BIOPERL_BRANCH = master

  EG_METAZOA_PLUGIN_URL = https://github.com/EnsemblGenomes/eg-web-metazoa
  EG_METAZOA_PLUGIN_BRANCH = release/eg/31
  EG_METAZOA_PLUGIN_PACKAGE = EG::Metazoa

  API_PLUGIN_URL = https://github.com/EnsemblGenomes/ensemblgenomes-api
  API_PLUGIN_BRANCH = release/eg/31
  API_PLUGIN_PACKAGE = EG::API

  EG_COMMON_PLUGIN_URL = https://github.com/EnsemblGenomes/eg-web-common
  EG_COMMON_PLUGIN_BRANCH = release/eg/31
  EG_COMMON_PLUGIN_PACKAGE = EG::Common

  PUBLIC_PLUGINS = [ ]

Connection/branch information for the Github repositories to be cloned

• ENSEMBL_URL/ENSEMBL_BRANCH and BIOPERL_URL/BIOPERL_BRANCH are always required. Several Ensel]mbl repositories are git cloned from ENSEMBL_URL for both the Ensembl website and to support the import pipeline.
• Additional plugins can be loaded from any public git repository by specifying <NAME>_PLUGIN_URL, <NAME>_PLUGIN_BRANCH and <NAME>_PLUGIN_PACKAGE as above. Plugins specified in this way will be added to ensembl-webcode/conf/Plugins.pm in the order they are listed in the .ini file so those at the top of the list will overwrite functions in plugins further down the list.
• PUBLIC_PLUGINS can be loaded from the Ensembl public-plugins repository by specifying the directory and package name of each repository as in PUBLIC_PLUGINS = [ ensembl|EnsEMBL::Ensembl genoverse|EnsEMBL::Genoverse ]

Ensembl mirror setup

[REPOSITORIES]
  ENSEMBL_URL = https://github.com/Ensembl
  ENSEMBL_BRANCH = release/84

  BIOPERL_URL = https://github.com/bioperl
  BIOPERL_BRANCH = master

  PUBLIC_PLUGINS = [ ensembl|EnsEMBL::Ensembl ]

Lepbase setup

[REPOSITORIES]
  ENSEMBL_URL = https://github.com/Ensembl
  ENSEMBL_BRANCH = release/84

  SEARCH_PLUGIN_URL = https://github.com/lepbase/lepbase-search
  SEARCH_PLUGIN_BRANCH = master
  SEARCH_PLUGIN_PACKAGE = LepBase::Search

  BLAST_PLUGIN_URL = https://github.com/lepbase/lepbase-blast-linkout
  BLAST_PLUGIN_BRANCH = master
  BLAST_PLUGIN_PACKAGE = LepBase::BLAST

  BIOPERL_URL = https://github.com/bioperl
  BIOPERL_BRANCH = master

  LEPBASE_PLUGIN_URL = https://bitbucket.org/lepbase/lepbase-ensembl
  LEPBASE_PLUGIN_BRANCH = develop
  LEPBASE_PLUGIN_PACKAGE = EG::LepBase

  API_PLUGIN_URL = https://github.com/EnsemblGenomes/ensemblgenomes-api
  API_PLUGIN_BRANCH = release/eg/31
  API_PLUGIN_PACKAGE = EG::API

  EG_COMMON_PLUGIN_URL = https://github.com/EnsemblGenomes/eg-web-common
  EG_COMMON_PLUGIN_BRANCH = release/eg/31
  EG_COMMON_PLUGIN_PACKAGE = EG::Common

  PUBLIC_PLUGINS = [ ]