[METHOD_LINK]

[METHOD_LINK]
    BLASTZ_NET = [ DNA-DNA_ALIGNMENT GenomicAlignBlock.pairwise_alignment ]
    TRANSLATED_BLAT = [ DNA-DNA_ALIGNMENT GenomicAlignBlock.pairwise_alignment ]
    TRANSLATED_BLAT_NET = [ DNA-DNA_ALIGNMENT GenomicAlignBlock.pairwise_alignment ]
    PECAN = [ DNA-DNA_ALIGNMENT GenomicAlignBlock.multiple_alignment ]
    ORTHEUS = [ DNA-DNA_ALIGNMENT GenomicAlignTree.tree_alignment ]
    LASTZ_NET = [ DNA-DNA_ALIGNMENT GenomicAlignBlock.pairwise_alignment ]
    ATAC = [ DNA-DNA_ALIGNMENT GenomicAlignBlock.pairwise_alignment ]
    SYNTENY = [ GENOMIC_SYNTENY SyntenyRegion.synteny ]
    ENSEMBL_ORTHOLOGUES = [ PROTEIN_HOMOLOGY Homology.homology ]
    ENSEMBL_PARALOGUES = [ PROTEIN_HOMOLOGY Homology.homology ]
    ENSEMBL_PROJECTIONS = [ PROTEIN_HOMOLOGY Homology.homology ]
    ENSEMBL_HOMOEOLOGUES = [ PROTEIN_HOMOLOGY Homology.homology ]
    FAMILY = [ PROTEIN_FAMILY Family.family ]
    PROTEIN_TREES = [ PROTEIN-NCRNA_TREE ProteinTree.protein_tree_node ]
    GERP_CONSTRAINED_ELEMENT = [ PROTEIN-NCRNA_TREE GenomicAlignBlock.constrained_element ]

Contains names and classes of methods used with the main table in which results are stored. Each method follows the pattern: KEY = [ METHOD_CLASS DATABASE_TABLE.DATA_TYPE ].

Methods are defined in this way to ensure consistency with the compara database and the METHOD_CLASS must be one of:

• DNA-DNA_ALIGNMENT
• GENOMIC_SYNTENY
• PROTEIN_HOMOLOGY
• PROTEIN_FAMILY
• PROTEIN-NCRNA_TREE