[TAXA]

[TAXA]
	BOMMOR = bombyx_mori_core_31_84_1
	DANPLE = danaus_plexippus_core_31_84_1
	HELMEL = heliconius_melpomene_core_31_84_1
	MELCIN = melitaea_cinxia_core_31_84_1
	BYCANY = bicyclus_anynana_nba01_core_31_84_1
	PLOINT = plodia_interpunctella_v1_core_31_84_1
	PIENAP = pieris_napi_das5_core_31_84_1
	PLUXYL = plutella_xylostella_dbmfjv1x1_core_31_84_1
	CHISUP = chilo_suppressalis_csuogs1_core_31_84_1
	PAPGLA = papilio_glaucus_v1x1_core_31_84_1
	LERACC = lerema_accius_v1x1_core_31_84_1
	PAPPOL = [ Papilio_polytes 76194 ]
	PAPXUT = [ Papilio_xuthus 66420 ]
	MANSEX = manduca_sexta_msex1_core_31_84_1

For each taxon in the compara analysis, the [TAXA] stanza links the name used within the sequence/tree files to the associated core database.

Taxa that do not have a core database may be included in a compara analysis by providing a species name and NCBI taxonomy ID, e.g. PAPPOL = [ Papilio_polytes 76194 ]